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About the Help & Support category
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0
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963
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March 28, 2025
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Availability of preprocessed training data
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3
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62
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April 13, 2026
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Splice Junction Plot - Please help me understand which ones are forward splicing(linear) and which ones are back splicing?
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3
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230
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April 9, 2026
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Variant scorer quantiles not implemented in ag_research
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3
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69
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April 8, 2026
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Any way to access embeddings?
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5
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1424
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April 2, 2026
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How to properly predict gene expression and histone changes for a large deletion using predict_sequence function
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3
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85
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April 2, 2026
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Estimate the functional impact of deletions (in Kb) using the alpha genome
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3
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137
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March 25, 2026
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Inquiry regarding availability of precomputed whole-genome output tracks
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1
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59
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March 24, 2026
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Exporting output data
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3
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72
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March 19, 2026
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Question about mm10 GTF annotation used in AlphaGenome
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1
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26
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March 17, 2026
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Issue with remote genome fasta files
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3
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38
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March 12, 2026
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Predicting variant effects in cell lines without ontology terms
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3
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77
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March 11, 2026
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Question on alphagenome’s RNA-seq Track: Relative Score or Absolute Value?
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1
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82
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March 11, 2026
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I'm an infj system level thinker asserting myself in the game
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0
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38
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March 6, 2026
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Why are there different tracks for different cell line
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5
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1306
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March 6, 2026
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Did AlphaGenome Use Reference Genome DNA or Sequencing Data to Predict Functional Genomic Tracks during training?
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2
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65
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March 4, 2026
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Single variant genome position
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1
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57
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February 26, 2026
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How are people using Illumina bulk RNA-seq with AlphaGenome?
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2
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272
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February 26, 2026
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Seeking clarification on genome.Variant coordinate and strand conventions
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1
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69
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February 26, 2026
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LoRA Finetuning on Custom CUT&Tag Dataset
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4
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211
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February 24, 2026
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APA Predict Variant Effects
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3
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1319
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February 24, 2026
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Val and test in FOLD_1 compared to Borzoi
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2
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143
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February 24, 2026
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Missing variant annotations after scoring
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1
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27
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February 24, 2026
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Predicted ALT expression and the REF expression separately
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1
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107
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February 24, 2026
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gene in skeletal tissue or osteoclast
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1
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52
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February 24, 2026
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Finding the most relevant ontology CURIE
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1
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830
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February 24, 2026
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How to fine-tune for new downstream tasks (such as identifying polyA sites) and extract embeddings?
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1
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71
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February 24, 2026
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Mouse reference genome
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5
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913
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February 24, 2026
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Share some training scripts and evaluation usage notebook
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3
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209
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February 20, 2026
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What PC parameters are required? (RAM, processor, etc.)
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4
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999
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February 16, 2026
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