|
Updating variant score quantiles
|
|
1
|
62
|
June 22, 2026
|
|
Resolving Authentication Failures (Anonymous Caller / ADC) for Local Python Access to Private GCS Buckets
|
|
0
|
2
|
June 22, 2026
|
|
Any chance of zebrafish (danRer11) support?
|
|
1
|
39
|
June 16, 2026
|
|
Reproducing AlphaGenome becnhmarks
|
|
2
|
67
|
June 15, 2026
|
|
How to predict TF binding across genome
|
|
1
|
49
|
June 15, 2026
|
|
Issue getting new API key
|
|
2
|
34
|
June 12, 2026
|
|
Status = StatusCode.INTERNAL error
|
|
6
|
69
|
June 11, 2026
|
|
Flagging issue with indel inference and proposed temporary workaround
|
|
1
|
104
|
June 8, 2026
|
|
What is the correct ontology_curie (UBERON ID) to pull gtex_tissue metadata for GTEx Skeletal Muscle?
|
|
2
|
26
|
June 8, 2026
|
|
Reproducing Chrombpnet becnhmarks
|
|
2
|
49
|
June 8, 2026
|
|
Validity of raw vs. quantile scores for promoter variant effects when gene body extends beyond 16 kb sequence window
|
|
1
|
57
|
June 2, 2026
|
|
Inqiry on Splicing Junction Visualization and Data Extraction
|
|
1
|
38
|
June 2, 2026
|
|
Why do only some variants get splicing scores?
|
|
1
|
54
|
June 1, 2026
|
|
AlphaGenome Viewer — a web UI for querying AlphaGenome without code
|
|
1
|
532
|
May 24, 2026
|
|
RNA-seq effects tend to be higher for variants to the left of the gene
|
|
2
|
77
|
May 21, 2026
|
|
HEK293T (EFO:0001184) DNase-seq and CAGE track availability
|
|
1
|
27
|
May 20, 2026
|
|
Issues encountered when calling the API
|
|
1
|
33
|
May 20, 2026
|
|
New Skill Alert: AlphaGenome Genomic Variant Analysis on Antigravity!
|
|
0
|
109
|
May 20, 2026
|
|
How can I use the output of histone modifications prediction to interpret the different/significant histone combination in each peak?
|
|
0
|
32
|
May 20, 2026
|
|
Variant scorer quantiles not implemented in ag_research
|
|
4
|
144
|
May 15, 2026
|
|
REF and ALT tracks look identical even with high quantile_score
|
|
1
|
84
|
May 14, 2026
|
|
Ablation Study Clarification: Tiling and Interval Definition for Splice Junctions
|
|
2
|
73
|
May 12, 2026
|
|
NN Architecture
|
|
0
|
51
|
May 11, 2026
|
|
Best way to aggregate AlphaGenome scores across tracks and modalities for variant prioritization?
|
|
2
|
123
|
May 8, 2026
|
|
Can the raw_score values be compared across different cell/sample types, transcription factors, and variants?
|
|
2
|
84
|
May 5, 2026
|
|
Support for Multi-Base Mutations in AlphaGenome
|
|
3
|
1298
|
April 29, 2026
|
|
Clarification on Borzoi tracks used for CAGI5 MPRA benchmarking
|
|
0
|
50
|
April 29, 2026
|
|
Can we change the width in the scorer function?
|
|
4
|
64
|
April 29, 2026
|
|
ISM implementation/efficiency
|
|
4
|
116
|
April 28, 2026
|
|
Sequence centering around non-variant position
|
|
1
|
41
|
April 28, 2026
|