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Ablation Study Clarification: Tiling and Interval Definition for Splice Junctions
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0
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10
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April 30, 2026
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Support for Multi-Base Mutations in AlphaGenome
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3
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1233
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April 29, 2026
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Clarification on Borzoi tracks used for CAGI5 MPRA benchmarking
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0
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14
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April 29, 2026
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Can we change the width in the scorer function?
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4
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30
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April 29, 2026
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ISM implementation/efficiency
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4
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57
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April 28, 2026
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Sequence centering around non-variant position
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1
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21
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April 28, 2026
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RNA-seq effects tend to be higher for variants to the left of the gene
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1
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14
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April 27, 2026
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Best way to aggregate AlphaGenome scores across tracks and modalities for variant prioritization?
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1
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23
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April 27, 2026
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REF and ALT tracks look identical even with high quantile_score
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0
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14
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April 27, 2026
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Interest in building an R wrapper for the AlphaGenome API
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6
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66
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April 25, 2026
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REF and ALT tracks look identical even with high raw_score and quantile_score
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1
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34
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April 22, 2026
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Raw score calculation mismatch
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2
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30
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April 22, 2026
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Availability of preprocessed training data
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3
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88
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April 13, 2026
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Splice Junction Plot - Please help me understand which ones are forward splicing(linear) and which ones are back splicing?
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3
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240
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April 9, 2026
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Is there a way to obtain embeddings?
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3
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1464
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April 9, 2026
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Variant scorer quantiles not implemented in ag_research
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3
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82
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April 8, 2026
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Validating AlphaGenome scores in Sports Physiology and High Performance
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2
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72
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April 7, 2026
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Any way to access embeddings?
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5
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1441
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April 2, 2026
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How to properly predict gene expression and histone changes for a large deletion using predict_sequence function
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3
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96
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April 2, 2026
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Estimate the functional impact of deletions (in Kb) using the alpha genome
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3
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154
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March 25, 2026
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Inquiry regarding availability of precomputed whole-genome output tracks
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1
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73
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March 24, 2026
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Retina tissue - missing from AlphaGenome tissue bank
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1
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87
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March 20, 2026
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Proposal for Analyzing Epigenetic Age Markers With AlphaGenome
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7
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1726
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March 19, 2026
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Exporting output data
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3
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88
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March 19, 2026
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Question about mm10 GTF annotation used in AlphaGenome
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1
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28
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March 17, 2026
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Alphagenome-ft: a fine-tuning package for alphagenome & Perturbation Assay Fine-Tuning Results
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1
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371
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March 12, 2026
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Issue with remote genome fasta files
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3
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43
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March 12, 2026
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Predicting variant effects in cell lines without ontology terms
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3
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88
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March 11, 2026
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Question on alphagenome’s RNA-seq Track: Relative Score or Absolute Value?
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1
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103
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March 11, 2026
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I'm an infj system level thinker asserting myself in the game
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0
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42
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March 6, 2026
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